Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRP rs78295170 chr21:44249977 T/G 0.000169 288 25.53 43.53 13.07 KM Plot
KIRP rs78325240 chr1:58998478 A/G 2.29E-5 289 25.6 27.43 13.17 KM Plot
KIRP rs78327914 chr10:124811534 A/G 0.000128 285 25.4 28.17 18.33 KM Plot
KIRP rs78404303 chr7:167142 T/C 4.62E-8 280 26 27.75 10.7 KM Plot
KIRP rs78457119 chr17:80848714 G/A 2.67E-6 285 26.2 25.6 16.77 KM Plot
KIRP rs78514029 chr10:88202181 G/T 5.63E-8 286 26.38 22.57 9.77 KM Plot
KIRP rs78534732 chr21:44231232 T/C 0.000106 284 25.23 40.7 13.07 KM Plot
KIRP rs7857382 chr9:123341189 G/T 3.62E-7 289 26.37 21.37 10.7 KM Plot
KIRP rs78586043 chr10:94612458 T/G 1.03E-5 283 26.2 25.75 5.48 KM Plot
KIRP rs78593532 chr10:124808968 T/C 2.28E-9 285 25.62 26.37 13.17 KM Plot
KIRP rs78624894 chr2:152889516 G/A 1.66E-7 285 24.8 28.07 10.7 KM Plot
KIRP rs78638785 chr18:75527982 G/A 3.44E-5 282 26 23.8 3.73 KM Plot
KIRP rs7863917 chr9:103452057 C/T 2.48E-7 289 25.97 23.08 10.7 KM Plot
KIRP rs78710864 chr12:49915830 C/A 6.45E-6 280 25.97 34.97 10.97 KM Plot
KIRP rs78715301 chr11:47091555 C/T 9.01E-12 287 25.57 29.8 10.82 KM Plot